Projects

Our standards development efforts target key gaps in data interoperability across the source-to-outcome (S2O) continuum. Working with subject matter experts and stakeholder communities, we are expanding the Biolink Model and related frameworks to better represent chemical fate, exposure, dosimetry, and health outcome data in a way that supports integrated, machine-readable analyses.

Schema for Outcomes, Measurements Assays Environmental Health Sciences Data Standard
Schema for Outcomes, Measurements & Assays Environmental Health Sciences Data Standard SOMA Website

A LinkML schema for representing Key Event and Outcome measurements, assays, and experimental protocols in the context of environmental health sciences (EHS) outcomes research.

Supporting source-to-outcome assessment in toxicology through data interoperability
Supporting source-to-outcome assessment in toxicology through data interoperability SOT 2026

A LinkML-based data model schema, developed through expert working group engagement, is applied to a PM₂.₅ Adverse Outcome Pathway Bayesian Network to demonstrate probabilistic prediction of mechanistic key events.

A mechanistic use case to support data interoperability across the source to outcome continuum in Environmental Health Science
A mechanistic use case to support data interoperability across the source to outcome continuum in Environmental Health Science NCSOT 2025

A preliminary Adverse Outcome Pathway Bayesian Network linking PM₂.₅ exposure to decreased lung function is developed as a quantitative test system for evaluating data interoperability standards.

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Data Standards to Support Integrated Source to Outcome Modeling
Data Standards to Support Integrated Source to Outcome Modeling SOT 2025

A phased, community-driven approach to developing and testing Biolink Model standards across environmental health science subdomains, demonstrated through a PM₂.₅ pilot use case with synthetic population modelling.

Data Standards to Support Integrated Source to Outcome Modeling
Data Standards to Support Integrated Source to Outcome Modeling ASCCT 2024

A coordinated effort to expand data standards and terminologies across environmental health science subdomains to improve interoperability along the source-to-outcome continuum.